Multiple sentences inside parenthesis
Solution 1:
I would punctuate around parentheses the same way as dashes.
With dashes, the sentence would look like this:
This morning I was distracted by a plane — or was it Superman? I'm not very sure — so I tripped.
Therefore, with parentheses it would be:
This morning I was distracted by a plane (or was it Superman? I'm not very sure) so I tripped.
That said, I prefer dashes here, because the middle phrase clearly relates to the topic of the sentence. Parentheses are better reserved for signaling a stronger digression from the main topic, e.g. —
This morning I was distracted by a plane (they're built in a factory the next town over) so I tripped.