What does "whisper thin" mean?
The phrase seems to come more from the verb "to thin":
OED
1 To make thin; to reduce in thickness or depth;
1793 Trans. Soc. Arts (ed. 2) 5 204 The two ends are to be thinned off in form of a wedge.
and from The Freedictionary: we have "thin"(adjective) being "dilute" or "to dilute"
2020 Broth - A thin, clear soup based on stock, to which rice, barley, meat, or vegetables may be added.
2020 Greybeard EL&U "He added turpentine in order to thin the paint."
Thus we see that a soup is thicker than a broth.
"To thin" was then used figuratively in the sense of reduce or dilute.
1787 T. Jefferson Writings (1859) II. 117 Real friends, whose affections are not thinned to cob-web.
Sir A. C. Doyle in "Round the Red Lamp" writes:
"It was then I learned that [...] that rough voice could thin into a whisper when it spoke to a sick child.
Thus we have whisper thin = as thin as a whisper = as weak and diluted (in sound) as a whisper (which is "thin").
So now we have whisper being used figuratively to mean "thin", and "thin" being literal so "the cat was whisper thin" = "the cat was thin thin = "the cat was very thin indeed.