The Absolute Value in the Integral of $1/x$
For $x$ positive: $ \frac{d}{dx}\ln{x}=\frac{1}{x} $
For $x$ negative: $ \frac{d}{dx}\ln{(-x)}=\frac{-1}{-x}=\frac{1}{x} $
So when you're integrating $\frac{1}{x}$, if $x$ is positive you'll get $\ln{x}+C$, and if $x$ is negative you'll get $\ln{(-x)}+C$. To summarize $\ln{|x|} + C$.
And if you want to know $\int\frac{1}{x}dx$ is not exactly equal to $\ln|x|+C$. The constants could be different for positive or negative $x$.
$$ \int\frac{1}{x}dx = \begin{cases} \ln{x} + C_1 \qquad \text{for $x$ positive} \\ \ln{(-x)} + C_2 \qquad \text{for $x$ negative} \end{cases} $$
$\int_{-2}^{-1}\frac{1}{x}dx$ has a value, however $\ln(-1)$ and $\ln(-2)$ will be more complicated to evaluate since $\ln(x)$ is only defined on $\mathbb{R}$ for positive numbers... Actually since $\frac{1}{x} = -\frac{1}{-x}$ for every $x$, we have $$\ln(|-1|)-\ln(|-2|)=\int_{-2}^{-1}\frac{1}{x}dx=\int_2^1\frac{1}{x}dx = \ln(1)-\ln(2) = \ln\left(\frac{1}{2}\right)<0.$$
Your range of integration can't include zero, or the integral will be undefined by most of the standard ways of defining integrals. So we have to think of a range of integration which is strictly positive, or strictly negative.
What you wrote is perfectly valid for strictly positive x, so let's think about strictly negative x. We have
$\int_{-a}^{-b}\frac{1}{x}d x$
where $a>0$ and $b>0$, so the range of integration is strictly negative. Do a change of variables, $y=-x$. Then
$\int_{a}^{b}\frac{1}{y}d y$.
(There is a negative from the $y$ in the denominator, and $d x=-d y$, so the two negatives cancel.) We have converted the integral of $1/x$ over a strictly negative range to an integral of $1/y$ over a strictly positive range. The answer is $\ln b-\ln a$. Since the $y$ is just a variable of integration, we can replace it with $x$ if we like, and
$\int_{-a}^{-b}\frac{1}{x}d x=\int_{a}^{b}\frac{1}{x}d x$.
That's the definite integral; the analogous result for the indefinite integral is
$\int^{-x}\frac{1}{x}d x=\int^{x}\frac{1}{x}d x$ (to within a constant of integration).
I will offer a very simple intuitive approach.
If we take: $$ln(x)=\int_{1}^x \frac1u du$$
We find that $u=0$ is a point of discontinuity for the function $1/u$. So, you might notice that, for example, that for $ln(x)$, as $x$ approaches $0$, the function $ln(x)$ increases "beyond all bounds" in the negative direction, or that $ln(1)=0$: $$ln(1)=\int_{1}^1 \frac1u du=0$$
Supplement - If we take $F(x)$ as any primitive function and keeping in mind of the fundamental theorem of calculus where any primitive function differ only by a constant (in this case, the indefinite integral(s) of the natural logarithm, differing by a constant, makes intuitive sense) such that: $$F(x)=ln(x)+c=\int_{1}^x \frac1u du +c$$ $$\frac{d}{dx}F(x)=\frac{d}{dx}(ln(x)+c)=1/x$$
To be specific, the definition of the primitive function here is merely just $\frac{d}{dx}F(x)=f(x)$.
This answer is just to offer some basic intuitive sprinkle on the agreeable assertion "Your range of integration can't include zero..."@Роберт
Further Supplement - For further basic intuition, notice that $1/u$ as defined for the domain $(0,1]$ lacks a uniform modulus of continuity. However, the existence of a uniform modulus of continuity is implicit in the existence of any integral (as suggested by e.g. Bolzano–Weierstrass theorem etc., and in where I would say as according to the traditional definition of an integral as suggested by e.g. $\lim \limits_{\Delta x \to 0}\sum_{i}={f(x_i)}{\Delta x}$ defined for the interval $[a,b]$ such that $a+0\Delta x=a$ and $a+n\Delta x=b$ etc.).