Read multiple CSV files into separate data frames
Suppose we have files file1.csv, file2.csv, ... , and file100.csv in directory C:\R\Data and we want to read them all into separate data frames (e.g. file1, file2, ... , and file100).
The reason for this is that, despite having similar names they have different file structures, so it is not that useful to have them in a list.
I could use lapply
but that returns a single list containing 100 data frames. Instead I want these data frames in the Global Environment.
How do I read multiple files directly into the global environment? Or, alternatively, How do I unpack the contents of a list of data frames into it?
Thank you all for replying.
For completeness here is my final answer for loading any number of (tab) delimited files, in this case with 6 columns of data each where column 1 is characters, 2 is factor, and remainder numeric:
##Read files named xyz1111.csv, xyz2222.csv, etc.
filenames <- list.files(path="../Data/original_data",
pattern="xyz+.*csv")
##Create list of data frame names without the ".csv" part
names <-substr(filenames,1,7)
###Load all files
for(i in names){
filepath <- file.path("../Data/original_data/",paste(i,".csv",sep=""))
assign(i, read.delim(filepath,
colClasses=c("character","factor",rep("numeric",4)),
sep = "\t"))
}
Quick draft, untested:
Use
list.files()
akadir()
to dynamically generate your list of files.This returns a vector, just run along the vector in a
for
loop.Read the i-th file, then use
assign()
to place the content into a new variable file_i
That should do the trick for you.