Python CSV error: line contains NULL byte

As @S.Lott says, you should be opening your files in 'rb' mode, not 'rU' mode. However that may NOT be causing your current problem. As far as I know, using 'rU' mode would mess you up if there are embedded \r in the data, but not cause any other dramas. I also note that you have several files (all opened with 'rU' ??) but only one causing a problem.

If the csv module says that you have a "NULL" (silly message, should be "NUL") byte in your file, then you need to check out what is in your file. I would suggest that you do this even if using 'rb' makes the problem go away.

repr() is (or wants to be) your debugging friend. It will show unambiguously what you've got, in a platform independant fashion (which is helpful to helpers who are unaware what od is or does). Do this:

print repr(open('my.csv', 'rb').read(200)) # dump 1st 200 bytes of file

and carefully copy/paste (don't retype) the result into an edit of your question (not into a comment).

Also note that if the file is really dodgy e.g. no \r or \n within reasonable distance from the start of the file, the line number reported by reader.line_num will be (unhelpfully) 1. Find where the first \x00 is (if any) by doing

data = open('my.csv', 'rb').read()
print data.find('\x00')

and make sure that you dump at least that many bytes with repr or od.

What does data.count('\x00') tell you? If there are many, you may want to do something like

for i, c in enumerate(data):
    if c == '\x00':
        print i, repr(data[i-30:i]) + ' *NUL* ' + repr(data[i+1:i+31])

so that you can see the NUL bytes in context.

If you can see \x00 in the output (or \0 in your od -c output), then you definitely have NUL byte(s) in the file, and you will need to do something like this:

fi = open('my.csv', 'rb')
data = fi.read()
fi.close()
fo = open('mynew.csv', 'wb')
fo.write(data.replace('\x00', ''))
fo.close()

By the way, have you looked at the file (including the last few lines) with a text editor? Does it actually look like a reasonable CSV file like the other (no "NULL byte" exception) files?


data_initial = open("staff.csv", "rb")
data = csv.reader((line.replace('\0','') for line in data_initial), delimiter=",")

This works for me.


Reading it as UTF-16 was also my problem.

Here's my code that ended up working:

f=codecs.open(location,"rb","utf-16")
csvread=csv.reader(f,delimiter='\t')
csvread.next()
for row in csvread:
    print row

Where location is the directory of your csv file.


You could just inline a generator to filter out the null values if you want to pretend they don't exist. Of course this is assuming the null bytes are not really part of the encoding and really are some kind of erroneous artifact or bug.

with open(filepath, "rb") as f:
    reader = csv.reader( (line.replace('\0','') for line in f) )

    try:
        for row in reader:
            print 'Row read successfully!', row
    except csv.Error, e:
        sys.exit('file %s, line %d: %s' % (filename, reader.line_num, e))

I bumped into this problem as well. Using the Python csv module, I was trying to read an XLS file created in MS Excel and running into the NULL byte error you were getting. I looked around and found the xlrd Python module for reading and formatting data from MS Excel spreadsheet files. With the xlrd module, I am not only able to read the file properly, but I can also access many different parts of the file in a way I couldn't before.

I thought it might help you.