"Apple Watch Only" apps not showing on Apple Watch when using Configuration Profile on linked iPhone

Solution 1:

I was not able to find the app bundle IDs for the apps I mentioned in the question. Without the app bundle IDs you cannot add the apps to the whitelist. My solution to this issue was to enable blacklist mode for apps instead. This caused the missing apps to appear. Not able to use app whitelist mode, but this was the next best thing.