Will siding with The BOS mess up my supply lines?

During one of the Brotherhood side quests I am supposed to get supplies from a settlement that belongs to the Minutemen and has supply lines to another settlement but when I do that, there is a message saying that this settlement now belongs to the Brotherhood of Steel.

Will I have to setup those supply lines again?


Solution 1:

I went and did the quest again but I forgot to grab screenshots. I could still build structures(defense turrets and walls) and I didn't have to re-establish my supply lines.