Pandas reading csv as string type
Solution 1:
Update: this has been fixed: from 0.11.1 you passing str
/np.str
will be equivalent to using object
.
Use the object dtype:
In [11]: pd.read_csv('a', dtype=object, index_col=0)
Out[11]:
A B
1A 0.35633069074776547 0.745585398803751
1B 0.20037376323337375 0.013921830784260236
or better yet, just don't specify a dtype:
In [12]: pd.read_csv('a', index_col=0)
Out[12]:
A B
1A 0.356331 0.745585
1B 0.200374 0.013922
but bypassing the type sniffer and truly returning only strings requires a hacky use of converters
:
In [13]: pd.read_csv('a', converters={i: str for i in range(100)})
Out[13]:
A B
1A 0.35633069074776547 0.745585398803751
1B 0.20037376323337375 0.013921830784260236
where 100
is some number equal or greater than your total number of columns.
It's best to avoid the str dtype, see for example here.
Solution 2:
Like Anton T said in his comment, pandas
will randomly turn object
types into float
types using its type sniffer, even you pass dtype=object
, dtype=str
, or dtype=np.str
.
Since you can pass a dictionary of functions where the key is a column index and the value is a converter function, you can do something like this (e.g. for 100 columns).
pd.read_csv('some_file.csv', converters={i: str for i in range(0, 100)})
You can even pass range(0, N)
for N much larger than the number of columns if you don't know how many columns you will read.
Solution 3:
Nowadays, (pandas==1.0.5) it just works.
pd.read_csv(f, dtype=str)
will read everything as string except for NAN values (empty string, ‘#N/A’, ‘#N/A N/A’, ‘#NA’, ‘-1.#IND’, ‘-1.#QNAN’, ‘-NaN’, ‘-nan’,
‘1.#IND’, ‘1.#QNAN’, ‘’, ‘N/A’, ‘NA’, ‘NULL’, ‘NaN’, ‘n/a’,
‘nan’, ‘null’ if you don't want this strings to be parse as NAN use na_filter=False
)
Solution 4:
Use a converter that applies to any column if you don't know the columns before hand:
import pandas as pd
class StringConverter(dict):
def __contains__(self, item):
return True
def __getitem__(self, item):
return str
def get(self, default=None):
return str
pd.read_csv(file_or_buffer, converters=StringConverter())