Is there a way to obtain CPS and Thruoghput metrics in Linux?

I think it would be sufficient to describe these metrics' origins based on native Linux API.

Throughput

By the way, the throughput metric in general is something, that is external in relation to the testing object (OS Linux you're talking about). I.e. roughly speaking we have two hosts (e.g. client and server) and testing object between them. We blow the network traffic between client and server and record the (boundary) throughput of testing object (e.g. with iperf).
But from within OS Linux a simple way we can measure throughput is only per interface.
So you can just watch /proc/net/dev and calculate the delta of bytes per second:

sh-tst# cat /proc/net/dev 
Inter-|   Receive                                                |  Transmit
 face |bytes    packets errs drop fifo frame compressed multicast|bytes    packets errs drop fifo colls carrier compressed
    lo: 87016202  715723    0    0    0     0          0         0 87016202  715723    0    0    0     0       0          0
  eth3:       0       0    0    0    0     0          0         0        0       0    0    0    0     0       0          0
  eth2:       0       0    0    0    0     0          0         0        0       0    0    0    0     0       0          0
  eth1: 246415305 2899662    0 132906    0     0          0       230  5466117   19016    0    0    0     0       0          0
  eth0:       0       0    0    0    0     0          0         0        0       0    0    0    0     0       0          0

CPS

The same thing is for CPS metric. Basically it is an external measurement. But from within your Linux you can try to calculate it based on the /proc/net/stat/ip_conntrack:

sh-tst# cat /proc/net/stat/ip_conntrack 
entries  searched found new invalid ignore delete delete_list insert insert_failed drop early_drop icmp_error  expect_new expect_create expect_delete search_restart
000000f8  00001742 0003142f 0001e85a 00000079 00021333 0001e6cf 00003a3d 00003bc5 00000000 00000000 00000000 00000000  00000000 00000000 00000000 00000000
000000f8  00002389 0005f1a0 0003b6f3 00000085 0004286f 0003b59e 00003cea 00003e3f 00000000 00000000 00000000 00000000  00000000 00000000 00000000 00000000
000000f8  000002c0 00037a77 00000714 00000000 000382cb 00000825 00000724 00000616 00000000 00000000 00000000 00000000  00000000 00000000 00000000 00000000
000000f8  00000225 00026cf9 00000271 00000000 00026e48 00000348 000002bd 000001e6 00000000 00000000 00000000 00000000  00000000 00000000 00000000 00000000

From lnstat(8) man:

/proc/net/stat/ip_conntrack, /proc/net/stat/nf_conntrack Conntrack related counters. ip_conntrack is for backwards compatibility with older userspace only and shows the same data as nf_conntrack.

...

new Number of conntrack entries added which were not expected before.

In Linux connection tracking:

NEW -- meaning that the packet has started a new connection, or otherwise associated with a connection which has not seen packets in both directions, and

So seems that you want to calculate delta new per second.

Read more:

• https://stackoverflow.com/questions/596590/how-can-i-get-the-current-network-interface-throughput-statistics-on-linux-unix
• iptables: difference between NEW, ESTABLISHED and RELATED packets